HLAreporter 1.03 – HLA Typing from Next Generation Sequencing data

HLAreporter 1.03

:: DESCRIPTION

HLAreporter (HLA reporter) is a novel tool  for HLA typing from NGS data based on read-mapping using a comprehensive reference panel containing all known HLA alleles, followed by de novo assembly of the gene-specific short reads.

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::DEVELOPER

WANLING YANG’S GROUP IN BIOINFORMATICS @ University of Hong Kong

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux

:: DOWNLOAD

 HLAreporter

:: MORE INFORMATION

Citation

HLAreporter: a tool for HLA typing from next generation sequencing data.
Huang Y, Yang J, Ying D, Zhang Y, Shotelersuk V, Hirankarn N, Sham PC, Lau YL, Yang W.
Genome Med. 2015 Mar 16;7(1):25. doi: 10.1186/s13073-015-0145-3.