GMcloser 1.6.2 / GMvalue 1.3
GMcloser fills and closes the gaps present in scaffold assemblies, especially those generated by the de novo assembly of whole genomes with next-generation sequencing (NGS) reads.
GMvalue is a tool to determine misassembly sites in contigs and scaffolds.
:: MORE INFORMATION
GMcloser: closing gaps in assemblies accurately with a likelihood-based selection of contig or long-read alignments.
Kosugi S, Hirakawa H, Tabata S.
Bioinformatics. 2015 Aug 10. pii: btv465.