FuSeq 1.1.4

:: DESCRIPTION

FuSeq discovers fusion genes based on quasi-mapping to quickly map the reads, extract initial candidates from split reads and fusion equivalence classes of mapped reads, and finally apply multiple filters and statistical tests to get the final candidates.

::DEVELOPER

PROF. YUDI PAWITAN

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• R

:: DOWNLOAD

FuSeq

:: MORE INFORMATION

Citation

Vu TN, Deng W, Trac QT, Calza S, Hwang W, Pawitan Y.
A fast detection of fusion genes from paired-end RNA-seq data.
BMC Genomics. 2018 Nov 1;19(1):786. doi: 10.1186/s12864-018-5156-1. PMID: 30382840; PMCID: PMC6211471.