DotcodeR 1.0.1

:: DESCRIPTION

DotcodeR is a fast and efficient method for detecting structurally similar RNAs in genomic sequences by comparing their corresponding coarse-grained secondary structure dot plots at string level.

::DEVELOPER

Yuki Kato

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux

:: DOWNLOAD

DotcodeR

:: MORE INFORMATION

Citation

Kato Y, Gorodkin J, Havgaard JH.
Alignment-free comparative genomic screen for structured RNAs using coarse-grained secondary structure dot plots.
BMC Genomics. 2017 Dec 2;18(1):935. doi: 10.1186/s12864-017-4309-y. PMID: 29197323; PMCID: PMC5712110.