DIAlignR v1.1.2 – Chromatogram Alignment for Targeted Proteomics

DIAlignR v1.1.2

:: DESCRIPTION

DIAlignR is an R package for retention time alignment of targeted mass spectrometric data, including DIA and SWATH-MS data. This tool works with MS2 chromatograms directly and uses dynamic programming for alignment of raw chromatographic traces. DIAlignR uses a hybrid approach of global (feature-based) and local (raw data-based) alignment to establish correspondence between peaks.

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::DEVELOPER

Röst Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / MacOsX
  • R

:: DOWNLOAD

DIAlignR

:: MORE INFORMATION

Citation

Gupta S, Ahadi S, Zhou W, Röst H.
DIAlignR Provides Precise Retention Time Alignment Across Distant Runs in DIA and Targeted Proteomics.
Mol Cell Proteomics. 2019 Apr;18(4):806-817. doi: 10.1074/mcp.TIR118.001132. Epub 2019 Jan 31. PMID: 30705124; PMCID: PMC6442363.

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