CUDA-EC 1.02
:: DESCRIPTION
CUDA-EC is a scalable parallel algorithm for correcting sequencing errors in high-throughput short-read data so that error-free reads can be available before DNA fragment assembly.
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::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- C++ compiler
- NVIDIA CUDA SDK
:: DOWNLOAD
:: MORE INFORMATION
Citation
J Comput Biol. 2010 Apr;17(4):603-15. doi: 10.1089/cmb.2009.0062.
A parallel algorithm for error correction in high-throughput short-read data on CUDA-enabled graphics hardware.
Shi H, Schmidt B, Liu W, Müller-Wittig W.