ChIPModule 20130227 – Systematic discovery of Transcription Factors and their Cofactors from ChIP-seq data

ChIPModule 20130227

:: DESCRIPTION

ChIPModule is a software tool for systematical discoveray of transcription factors and their cofactors from ChIP-seq data. Given a ChIP-seq dataset and motifs of a large number of transcription factors, ChIPModule can efficiently identify groups of motifs,whose instances significantly co-occur in the ChIP-seq peak regions.

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::DEVELOPER

Hu Lab – Data Integration and Knowledge Discovery @ UCF

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows / MacOsX
  • Python

:: DOWNLOAD

 ChIPModule

:: MORE INFORMATION

Citation:

Pac Symp Biocomput. 2013:320-31.
ChIPModule: systematic discovery of transcription factors and their cofactors from ChIP-seq data.
Ding J, Cai X, Wang Y, Hu H, Li X.