bloutminer is a script for mining data from BLAST reports. Allows you to specify e.g. an E-value cutoff, a length cutoff and a percent identity cutoff, and extract a list of the hits satisfying these cutoffs. I normally use an E-value cutoff of 10 for my BLAST searches, and then extracts hits with bloutminer, allowing me to change the cutoffs at a later stage without redoing the whole BLAST search. Is also able to “pool” sequences into groups, based on their sequence tags. In addition, it can also output the N number of best matches to a query.
- Linux / MacOsX/ Windows
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