BIRD v1.1.1

:: DESCRIPTION

BIRD is a software to predict DNase I hypersensitivity (DNase-seq signal) based on gene expression data (support both human exon array and RNA-seq data). Using a pre-built model and input gene expression data, BIRD is capable to predict DNase-seq signal genome-wide (~1M genomic loci).

::DEVELOPER

Zhicheng Ji

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux / Windows
• R

:: DOWNLOAD

BIRD

:: MORE INFORMATION

Citation

Zhou W, Ji Z, Fang W, Ji H.
Global prediction of chromatin accessibility using small-cell-number and single-cell RNA-seq.
Nucleic Acids Res. 2019 Nov 4;47(19):e121. doi: 10.1093/nar/gkz716. PMID: 31428792; PMCID: PMC6821224.