ALLOY 0.2 – Ancestry Inference on Local Genomic Segments

ALLOY 0.2

:: DESCRIPTION

ALLOY (Accurate Local Ancestry Inference) is a fast and accurate method for local ancestry inference, which is the problem of labeling each position of the genome with an ancestral origin.

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::DEVELOPER

Serafim’s Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/MacOsX
  • Java

:: DOWNLOAD

 ALLOY

:: MORE INFORMATION

Citation

J Comput Biol. 2013 Mar;20(3):199-211. doi: 10.1089/cmb.2012.0088.
Ancestry inference in complex admixtures via variable-length Markov chain linkage models.
Rodriguez JM, Bercovici S, Elmore M, Batzoglou S.