DotcodeR 1.0.1
:: DESCRIPTION
DotcodeR is a fast and efficient method for detecting structurally similar RNAs in genomic sequences by comparing their corresponding coarse-grained secondary structure dot plots at string level.
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::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
:: DOWNLOAD
:: MORE INFORMATION
Citation
Kato Y, Gorodkin J, Havgaard JH.
Alignment-free comparative genomic screen for structured RNAs using coarse-grained secondary structure dot plots.
BMC Genomics. 2017 Dec 2;18(1):935. doi: 10.1186/s12864-017-4309-y. PMID: 29197323; PMCID: PMC5712110.