2LD / LDSHELL – Two-locus LD Calculator and Shell

2LD / LDSHELL

:: DESCRIPTION

2LD is a simple program calculating linkage disequilibrium (LD) measures between two polymorphic markers.

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LDSHELL is a shell program for 2LD

::DEVELOPER

Jing Hua Zhao

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • linux/Windows/

:: DOWNLOAD

 2LD , LDSHELL

:: MORE INFORMATION

Citation

Zhao, J. H. (2004)
2LD, GENECOUNTING and HAP: Computer programs for linkage disequilibrium analysis“.
Bioinformatics, 20, 1325-1326

Noonan, J.P., Li, J., Nguyen, L., Caolie, C., Dickson, M., Grimwood, J., Schmutz, J., Feldman, M. W., Myers, R. M. (2003),
Extensive linkage disequilibrium, a common 16.7-kilobase deletion, and evidence of balancing selection in the human protocadherin alpha cluster
Am. J. Hum. Genet.Vol. 72, pp. 621-635.

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