TROPICAL 1.0 – Simulation and Parameter Estimation of Reaction-diffusion Models

TROPICAL 1.0

:: DESCRIPTION

Tropical is a software for simulation and parameter estimation of reaction-diffusion models. Based on tiff images as input, Tropical estimates reaction and diffusion coefficients of user-defined differential equation models. Therefore Tropical allows the investigation of systems with inhomogeneous distribution of molecules, making it well suited for quantitative analyses of microscopy experiments such as Fluorescence recovery after photobleaching (FRAP).

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::DEVELOPER

EILSLABS

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux
  • QT

:: DOWNLOAD

 please contact Jürgen Eils.

:: MORE INFORMATION

Citation

Bioinformatics. 2006 Nov 1;22(21):2709-10. Epub 2006 Aug 29.
Tropical–parameter estimation and simulation of reaction-diffusion models based on spatio-temporal microscopy images.
Ulrich M, Kappel C, Beaudouin J, Hezel S, Ulrich J, Eils R.