VToD – Voting based Cancer module Identification by combining Topological and Data-driven Properties

VToD

:: DESCRIPTION

VToD is a voting-based cancer module identification algorithm by combining topological and data-driven properties by using the gene-gene relationship network as a source of data-driven information, and the PPI data as topological information.

::DEVELOPER

Data Mining & Computational Biology Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Windows

:: DOWNLOAD

VToD

:: MORE INFORMATION

Citation

PLoS One. 2013 Aug 5;8(8):e70498. doi: 10.1371/journal.pone.0070498. Print 2013.
Voting-based cancer module identification by combining topological and data-driven properties.
Azad AK1, Lee H.

Voting 4 – Discover Patterns, Motif, in a set of DNA sequences

Voting 4

:: DESCRIPTION

Voting is a software package that discovers common patterns, motif, in a set of DNA sequences. Voting is efficient to solve the planted (l,d) motif problem which discover a hidden length-l string motif appear in each input DNA sequence with at most d Hamming distance. Our package guarantees discovering all motifs in a short time.

::DEVELOPER

Bioinformatics Research Group of Hong Kong University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux

:: DOWNLOAD

Voting

:: MORE INFORMATION

Citation:

Francis Y.L. Chin and Henry C.M. Leung.
Voting Algorithms for Discovering Long Motifs (2005)
In Proceedings of Asia-Pacific Bioinformatics Conference (APBC) pages 261 – 271