VirusScan 1.1 – Detect Virus from Next Generation Sequencing data

VirusScan 1.1

:: DESCRIPTION

VirusScan pipeline is a fully automated and modular software package designed for the fast and accurate detection of known viruses from NGS data.

::DEVELOPER

Ding Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

VirusScan

:: MORE INFORMATION

Citation

Cao S, Wendl MC, Wyczalkowski MA, Wylie K, Ye K, Jayasinghe R, Xie M, Wu S, Niu B, Grubb R 3rd, Johnson KJ, Gay H, Chen K, Rader JS, Dipersio JF, Chen F, Ding L.
Divergent viral presentation among human tumors and adjacent normal tissues.
Sci Rep. 2016 Jun 24;6:28294. doi: 10.1038/srep28294. PMID: 27339696; PMCID: PMC4919655.