SC2P 1.0 – Two-phase differential Expression for single-cell RNA-seq

SC2P 1.0

:: DESCRIPTION

SC2P is a package designed for testing differential expression (DE) for data from single-cell RNA-seq experiment.

::DEVELOPER

Hao Wu, Ph.D.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows /Linux/ MacOsX
  • R

:: DOWNLOAD

SC2P

:: MORE INFORMATION

Citation

Wu Z, Zhang Y, Stitzel ML, Wu H.
Two-phase differential expression analysis for single cell RNA-seq.
Bioinformatics. 2018 Oct 1;34(19):3340-3348. doi: 10.1093/bioinformatics/bty329. PMID: 29688282; PMCID: PMC6157076.

TwoPhaseInd 1.0.0 – Two-Phase Independence

TwoPhaseInd 1.0.0

:: DESCRIPTION

TwoPhaseInd is a code for semiparametric estimation exploiting covariate independence in two-phase randomized trials

::DEVELOPER

James Dai (jdai@scharp.org) ,Charles Kooperberg

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 TwoPhaseInd

:: MORE INFORMATION

Citation

J. Y. Dai, M. LeBlanc, and C. Kooperberg (2009).
Semiparametric estimation exploiting covariate independence in two-phase randomized trials.
Biometrics, 65, 178-187.