splitMixed
:: DESCRIPTION
splitMixed finds in a matched tumor/normal paired-end reads dataset a consistent explanation for a (mixed) tumor-subset of deletions.
::DEVELOPER
Computational Methods for Paleogenomics and Comparative Genomics
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/ Windows/ MacOsX
- Java
:: DOWNLOAD
:: MORE INFORMATION
Citation
BMC Bioinformatics. 2011 Oct 5;12 Suppl 9:S21. doi: 10.1186/1471-2105-12-S9-S21.
Consistency-based detection of potential tumor-specific deletions in matched normal/tumor genomes.
Wittler R1, Chauve C.