Tag: Trend

TREND – Platform for Protein Evolution and Function Analysis

TREND

:: DESCRIPTION

TREND (TRee-based Exploration of Neighborhoods and Domains) is a platform for exploring protein function in prokaryotes based on phylogenetic, domain architecture and gene neighborhood analyses

::DEVELOPER

ZhulinLab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Gumerov VM, Zhulin IB.
TREND: a platform for exploring protein function in prokaryotes based on phylogenetic, domain architecture and gene neighborhood analyses.
Nucleic Acids Res. 2020 Jul 2;48(W1):W72-W76. doi: 10.1093/nar/gkaa243. PMID: 32282909; PMCID: PMC7319448.

HTR – Haplotype Trend Regression

HTR

:: DESCRIPTION

HTR is an Haplotype/Trait Association Software.

::DEVELOPER

Dmitri Zaykin

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux

:: DOWNLOAD

 HTR

:: MORE INFORMATION

Citation:

Zaykin DV, Westfall PH, Young SS, Karnoub MC, Wagner MJ, Ehm MG (2002),
“Testing association of statistically inferred haplotypes with discrete and continuous traits in samples of unrelated individuals“,
Human Heredity, 53:79-91.

Trend / jTrend 1.01 – Cellular Automata Simulation Environment

Trend / jTrend 1.01

:: DESCRIPTION

Trend is a general purpose cellular automata simulation environment with an integrated high level language compiler, a beautiful graphical user interface, and a fast, three stage cached simulation engine. This is the simulation system that was used to discover the first emergent self-replicating cellular automata rule set, and the first problem solving self-replication loop.

jTrend is a Java-based cellular automata simulator modeled after Trend. It inherits all the features of Trend such as dynamically changing cellular space sizes and defining the cellular automata rules “on the fly” using the Trend programming language.

::DEVELOPER

Complex Computation Laboratory ,Iowa State University

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Windows /Mac OsX
  • JAVA

:: DOWNLOAD

Registration First ; Trend / jTrend

:: MORE INFORMATION

N/A