SUBOPT – Aligns Two Protein Sequences

SUBOPT

:: DESCRIPTION

SUBOPT aligns two protein sequences and can enumerate and display both optimal alignments and near optimal alignments within any distance delta of the optimal score.

::DEVELOPER

 The Brutlag Bioinformatics Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C Complier

:: DOWNLOAD

 SUBOPT

:: MORE INFORMATION

Citation:

Naor, D. and Brutlag, D. L. (1994).
On Near-Optimal Alignments of Biological Sequences.
J. Computational Biology, 1(4), 349-366.