Tag: SNPHunter

SNPHunter 2.22 – Search Alignment File for SNPs

SNPHunter 2.22

:: DESCRIPTION

SNPHunter: Searches an alignment file (e.g. AceParser output) for SNPs using multiple parameters and filters (works with AssemblyFilter) for quality, homopolymer runs, and alternative splicing/assembly error. Options to include Blast annotation and ORF information for codon position and synonomous/nonsynonymous amino acid changes and to generate population specific output.

::DEVELOPER

J. Cris Vera

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

 SNPHunter

:: MORE INFORMATION

SNPHunter 1.75 – dbSNP Search & Management

SNPHunter 1.75

:: DESCRIPTION

SNPHunter is a tool for SNP Search and downloading with local management. It also offers flanking sequence downloading and automatic SNP filtering.

::DEVELOPER

Program for Population Genetics

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

SNPHunter

:: MORE INFORMATION

Citation

Lin Wang, Simin Liu, Tianhua Niu, Xin Xu (2005).
SNPHunter: a bioinformatic software for single nucleotide polymorphism data acquisition and management.
BMC bioinformatics. 6: 60.