SAMNetWeb – Simultaneous Analysis of Multiple Networks

SAMNetWeb

:: DESCRIPTION

SAMNetWeb is a web-based tool that enables functional enrichment analysis and visualization of high-throughput datasets. SAMNetWeb can analyse two distinct data types (e.g. mRNA expression and global proteomics) simultaneously across multiple experimental systems to identify pathways activated in these experiments and then visualize the pathways in a single interaction network.

::DEVELOPER

The Fraenkel Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • WEb Browser

:: DOWNLOAD

  NO

:: MORE INFORMATION

Citation:

Bioinformatics. 2014 Nov 19. pii: btu748. [Epub ahead of print]
SAMNetWeb: identifying condition-specific networks linking signaling and transcription.
Gosline SJ, Oh C, Fraenkel E.

HyperLasso – Simultaneous analysis of GWAs

HyperLasso

:: DESCRIPTION

HyperLasso is a software of simultaneous analysis of many SNPs and covariates

::DEVELOPER

BARGEN

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • C Compiler

:: DOWNLOAD

 HyperLasso

:: MORE INFORMATION

Citation

Genet Epidemiol. 2010 Dec;34(8):879-91. doi: 10.1002/gepi.20543.
SNP selection in genome-wide and candidate gene studies via penalized logistic regression.
Ayers KL, Cordell HJ.