shustring 2.6
:: DESCRIPTION
shustring takes one or more sequences as input and returns the corresponding shustrings. The input data need to be in FASTA format, i.e. for each input sequence a definition line followed by the string(s) of residues. Input sequences can be over any alphabet.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/ MacOsX
- C Compiler
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bernhard Haubold, Nora Pierstorff, Friedrich Möller and Thomas Wiehe
Genome comparison without alignment using shortest unique substrings
BMC Bioinformatics 2005, 6:123