Scripture Beta2
:: DESCRIPTION
Scripture is a method for transcriptome reconstruction that relies solely on RNA-Seq reads and an assembled genome to build a transcriptome ab initio.The statistical methods to estimate read coverage significance are also applicable to other sequencing data. Scripture also has modules for ChIP-Seq peak calling.
:DEVELOPER
:: REQUIREMENTS
- Linux / Windows / MacOsX
- Java
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Mitchell Guttman et al.
Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
Nature Biotechnology 28, 503–510 (2010)