rVista 2.0

:: DESCRIPTION

The rVISTA tool combines TFBS predictions, sequence comparisons and cluster analysis to identify noncoding DNA regions that are evolutionarily conserved and present in a specific configuration within genomic sequences. The newly developed version 2.0 of the rVISTA tool can process alignments generated by both the zPicture and blastz alignment programs or use pre-computed pairwise alignments of several vertebrate genomes available from the ECR Browser and GALA database.

::DEVELOPER

Ivan Ovcharenko Research Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

rVISTA 2.0: evolutionary analysis of transcription factor binding sites.
Loots GG, Ovcharenko I.
Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W217-21.