RUM 2.0.5_06
:: DESCRIPTION
RUM (RNA-Seq Unified Mapper) is an alignment, junction calling, and feature quantification pipeline specifically designed for Illumina RNA-Seq data.
::DEVELOPER
the Computational Biology and Informatics Laboratory at the University of Pennsylvania
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/ MacOsX
- Perl
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Gregory R. Grant, Michael H. Farkas, Angel Pizarro, Nicholas Lahens, Jonathan Schug, Brian Brunk, Christian J. Stoeckert Jr, John B. Hogenesch and Eric A. Pierce.
Comparative Analysis of RNA-Seq Alignment Algorithms and the RNA-Seq Unified Mapper (RUM)
Bioinformatics. 2011 Sep 15;27(18):2518-28. Epub 2011 Jul 19.