Rnnotator 3.5.0
:: DESCRIPTION
Rnnotator is an automated software pipeline that generates transcript models by de novo assembly of RNA-Seq data without the need for a reference genome.
::DEVELOPER
Zhong Wang at U.S. Department of Energy Joint Genome Institute
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- Perl
- BioPerl
- Blat
:: DOWNLOAD
:: MORE INFORMATION
Citation
BMC Genomics. 2010 Nov 24;11:663. doi: 10.1186/1471-2164-11-663.
Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads.
Martin J, Bruno VM, Fang Z, Meng X, Blow M, Zhang T, Sherlock G, Snyder M, Wang Z.