COMSAT – Residue Contact Prediction for Transmembrane Proteins

COMSAT

:: DESCRIPTION

COMSAT is a Support-Vector-Machine (SVM) and Mixed-Integer-Linear-Programming (MILP) based method for residue contact prediction in helical transmembrane proteins.

::DEVELOPER

COMSAT team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web Browser

:: DOWNLOAD

:: MORE INFORMATION

Citation:

COMSAT: Residue contact prediction of transmembrane proteins based on support vector machines and mixed integer linear programming.
Zhang H, Huang Q, Bei Z, Wei Y, Floudas CA.
Proteins. 2016 Mar;84(3):332-48. doi: 10.1002/prot.24979.

CORNET – Predictor of Residue Contacts in Proteins

CORNET

:: DESCRIPTION

CORNET is a method based on neural networks for predicting contact maps of proteins using as input chemico-physical and evolutionary information.

::DEVELOPER

Bologna Biocomputing Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web Browser

:: DOWNLOAD

No, Only Web Service

:: MORE INFORMATION

Citation

Protein Eng. 1999 Jan;12(1):15-21.
A neural network based predictor of residue contacts in proteins.
Fariselli P, Casadio R.