:: DESCRIPTION
POP-ASSIGN.XLS is an Excell sheet to estimate minimal number of loci for Population Assignment
:: DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
BERNATCHEZ, L., P. DUCHESNE. 2000.
Individual-based genotype analysis in studies of parentage and population assignment : how many loci, how many alleles ?
Canadian Journal of Fisheries and Aquatic Sciences. 57:1-12.
:: DESCRIPTION
AFLPOP (Amplified Fragment Length Polymorphism) is a population allocation and simulator program based on amplified fragment length polymorphism markers. The allocation method is an adaptation of Paetkau’s method for co-dominant alleles. Besides population allocation of specimens of unknown origin, re-allocation of sample genotypes, as well as allocation of artificial (Monte Carlo) specimens, may be run to estimate expected rates of correct allocations.
:: DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
DUCHESNE, P., L. BERNATCHEZ. 2002.
AFLPOP : A computer program for simulated and real population allocation based on AFLP data.
Molecular Ecology Notes. 3, 380-383.
:: DESCRIPTION
WHICHLOCI concerns these individual based population assignment methods but presents the method looking back on itself. Trial assignments with loci one at a time allows ranking of loci in terms of their efficiency for correct population assignment and conversely their propensity to cause false assignments. Subsequent trials with increasing numbers of loci determines what minimum number of which specific loci is required in order to attain defined power for population assignment.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Bioinformatics. 2003 Jul 22;19(11):1436-8.
Which genetic loci have greater population assignment power?
Banks MA, Eichert W, Olsen JB.
