:: DESCRIPTION
SEPP (SATé-enabled phylogenetic placement) is a general “boosting” technique to improve the accuracy and/or speed of phylogenetic placement techniques.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Pac Symp Biocomput. 2012:247-58.
SEPP: SATé-enabled phylogenetic placement.
Mirarab S1, Nguyen N, Warnow T.
:: DESCRIPTION
Pplacer (Phylogenetic Placement) places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment.Yhe software enables efficient phylogenetic placement and subsequent visualization, making likelihood-based phylogenetics methodology practical for large collections of reads
::DEVELOPER
Frederick (Erick) Matsen’s Group
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Frederick A Matsen, Robin B Kodner and E Virginia Armbrust
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
BMC Bioinformatics 2010, 11:538
