PETModule

:: DESCRIPTION

PETModule is a software developed to find enhancer target gene (ETG) pairs through a motif module based approach. The output of the software is the enhancer target gene pairs with a probability score that measures how likely the predicted target gene is reliable. PETModule only needs enhancer locations to predict their target genes.

::DEVELOPER

Hu Lab – Data Integration and Knowledge Discovery @ UCF

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• Python
• Java

:: DOWNLOAD

PETModule

:: MORE INFORMATION

Citation:

Sci Rep. 2016 Jul 20;6:30043. doi: 10.1038/srep30043.
PETModule: a motif module based approach for enhancer target gene prediction.
Zhao C, Li X, Hu H.