P4P

:: DESCRIPTION

P4P is a bioinformatics web service which has been conceived for bacterial strain classification based on peptide datasets. These peptide datasets are obtained from proteins by the in silico action of the three main human gut endoproteases (pepsin, trypsin and chemotrypsin). Peptides can be filtered by isolectric point, subcellular location, or amino acid length.

::DEVELOPER

SING Group.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

Blanco-Míguez A, Fdez-Riverola F, Lourenço A, Sánchez B.
P4P: a peptidome-based strain-level genome comparison web tool.
Nucleic Acids Res. 2017 Jul 3;45(W1):W265-W269. doi: 10.1093/nar/gkx389. PMID: 28482090; PMCID: PMC5570244.

CancerPDF

:: DESCRIPTION

CancerPDF is a manually curated database of cancer-associated peptides found in different human bodyfluids (e.g., serum, urine, plasma and saliva). These peptides were experimentally identified using diffrent techniques of proteomics. It covers nearly 30 types of human cancers.

::DEVELOPER

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web Browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

CancerPDF: A repository of cancer-associated peptidome found in human biofluids.
Bhalla S, Verma R, Kaur H, Kumar R, Usmani SS, Sharma S, Raghava GPS.
Sci Rep. 2017 May 4;7(1):1511. doi: 10.1038/s41598-017-01633-3.

Tag: Peptidome

P4P – Peptidomes for Phylogenies

P4P

CancerPDF – Cancer Peptidome Database of BioFluids

CancerPDF