NovoHMM – hidden Markov model for de novo Peptide Sequencing

NovoHMM

:: DESCRIPTION

NovoHMM is a software for hidden Markov model for de novo peptide sequencing.

::DEVELOPER

Bernd Fischer

:: SCREENSHOTS

NovoHMM

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

 NovoHMM

:: MORE INFORMATION

Citation

Anal Chem. 2005 Nov 15;77(22):7265-73.
NovoHMM: a hidden Markov model for de novo peptide sequencing.
Fischer B, Roth V, Roos F, Grossmann J, Baginsky S, Widmayer P, Gruissem W, Buhmann JM.

UniNovo 20130520 – Universal tool for de novo Peptide Sequencing

UniNovo 20130520

:: DESCRIPTION

UniNovo is a universal de novo peptide sequencing tool that works well for various types of spectra and spectral pairs (e.g., CID, ETD, HCD, CID/ETD, etc). The accuracy of de novo reconstructions generated by UniNovo is better than or comparable to PepNovo+ or PEAKS. Moreover, UniNovo also estimates the error rate of the reported reconstruction.

::DEVELOPER

CCMS The Center for Computational Mass Spectrometry

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/ MacOsX
  • Java

:: DOWNLOAD

 UniNovo

:: MORE INFORMATION

Citation

Bioinformatics. 2013 Aug 15;29(16):1953-62. doi: 10.1093/bioinformatics/btt338. Epub 2013 Jun 12.
UniNovo: a universal tool for de novo peptide sequencing.
Jeong K1, Kim S, Pevzner PA.