:: DESCRIPTION
CoMDP is a package for de novo identifying co-occurring driver pathways in cancer with mutation data.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
BMC Bioinformatics. 2014 Aug 9;15:271. doi: 10.1186/1471-2105-15-271.
Discovery of co-occurring driver pathways in cancer.
Zhang J, Wu LY, Zhang XS, Zhang S.
:: DESCRIPTION
MDPFinder is a package for identifying driver pathways promoting cancer proliferation and filtering out the unfunctional and passenger ones.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2012 Nov 15;28(22):2940-7. doi: 10.1093/bioinformatics/bts564. Epub 2012 Sep 14.
Efficient methods for identifying mutated driver pathways in cancer.
Zhao J, Zhang S, Wu LY, Zhang XS.
:: DESCRIPTION
Dendrix (De novo Driver Exclusivity) is an algorithm for discovery of mutated driver pathways in cancer using only mutation data. It finds sets of genes, domains, or nucleotides whose mutations exhibit both high coverage and high exclusivity in the analyzed samples.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
F. Vandin, E. Upfal, B.J. Raphael. (2011)
De novo Discovery of Mutated Driver Pathways in Cancer.
Genome Res. 2011 Jul 11
