Tag: Multi-Relief

Multi-Harmony – Multi-group Sequence Harmony & multi-Relief

Multi-Harmony

:: DESCRIPTION

The multi-Harmony server provides simplified and powerful interactive access to improved Sequence Harmony (SH) and multi-Relief (mR) methods for detection of sub-family specific residues in alignments.

::DEVELOPER

The Centre for Integrative Bioinformatics VU

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W35-40. doi: 10.1093/nar/gkq415. Epub 2010 Jun 4.
Multi-Harmony: detecting functional specificity from sequence alignment.
Brandt BW1, Feenstra KA, Heringa J.

Multi-Relief – Recognize Specificity Determining Residues from Multiple Sequence Alignment

Multi-Relief

:: DESCRIPTION

multi-RELIEF is a novel approach for identifying specificity residues that is based on RELIEF, a state-of-the-art Machine-Learning technique for feature weighting.

::DEVELOPER

Elena Marchiori

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows
  • MatLab

:: DOWNLOAD

 Multi-Relief

:: MORE INFORMATION

Citation

K. Ye, A. Feenstra, A.Ijzerman, J. Heringa, E. Marchiori.
Multi-RELIEF: a method to recognize specificity determining residues from multiple sequence alignments using a Machine Learning approach for feature weighting.
Bioinformatics, 24(1), pp. 18-25, 2008.