Tag: MSS

MSS v1 – Analysis of Genome-wide Association Data

MSS v1

:: DESCRIPTION

MSS (Maximal Segmental Score) is an R program for the analysis of genome-wide association data

::DEVELOPER

Cathy S.J. Fann lab,Institute of Biomedical Informatics, National Yang-Ming University, Taipei

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows
  • R package

:: DOWNLOAD

 MSS

:: MORE INFORMATION

Citation

Using maximal segmental score in genome-wide association studies.
Lin YC, Hsiao CL, Hsieh AR, Lian IeB, Fann CS.
Genet Epidemiol. 2012 Sep;36(6):594-601. doi: 10.1002/gepi.21652.

MSS 1.0 – Finding all Maximal Scoring Subsequences

MSS 1.0

:: DESCRIPTION

MSS (Maximal Scoring Subsequences) is a practical, linear time algorithm to find, in a sequence of numeric scores, those nonoverlapping, contiguous subsequences having greatest total scores.

::DEVELOPER

The Computational & Synthetic Biology group – COMPUTER SCIENCE & ENGINEERING at UNIVERSITY OF WASHINGTON

:: SCREENSHOTS

Command Line

:: REQUIREMENTS

:: DOWNLOAD

MSS Source Code

:: MORE INFORMATION

Citation:

W. Ruzzo, M. Tompa, “A linear time algorithm for finding all maximal scoring subsequences”, Proc Int Conf Intell Syst Mol Biol, (1999) 234-41. Pubmed 10786306.