BetaCavityWeb – Computing Molecular Voids and Channels with their Mass Properties

BetaCavityWeb

:: DESCRIPTION

BetaCavityWeb computes molecular voids and channels with guaranteed mathematical correctness and computational efficiency and also computes their geometrical properties.

::DEVELOPER

Voronoi Diagram Research Center

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

BetaCavityWeb: a webserver for molecular voids and channels.
Kim JK, Cho Y, Lee M, Laskowski RA, Ryu SE, Sugihara K, Kim DS.
Nucleic Acids Res. 2015 Apr 22. pii: gkv360.
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BetaVoid v1 – Molecular voids via beta-complexes and Voronoi diagrams

BetaVoid v1

:: DESCRIPTION

BetaVoid recognizes molecular voids in the van der Waals surface or the Lee-Richards (solvent accessible) surface and computes their mass properties such the volume and the boundary area.

::DEVELOPER

the Voronoi Diagram Research Center

:: SCREENSHOTS

:: REQUIREMENTS

Windows / Linux

:: DOWNLOAD

BetaVoid

:: MORE INFORMATION

Citation

Proteins. 2014 Feb 15. doi: 10.1002/prot.24537. [Epub ahead of print]
BetaVoid: Molecular voids via beta-complexes and Voronoi diagrams.
Kim JK1, Cho Y, Laskowski RA, Ryu SE, Sugihara K, Kim DS.