PATHd8 – Phylogenetic Dating of Large Trees without Molecular Clock

PATHd8

:: DESCRIPTION

PATHd8 is a program for phylogenetic dating of large trees without a molecular clock

::DEVELOPER

Tom Britton

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX / Windows

:: DOWNLOAD

   PATHd8

:: MORE INFORMATION

Citation

PATHd8 – a program for phylogenetic dating of large trees without a molecular clock
by Tom Britton, Cajsa Anderson, David Jacquet, Samuel Lundqvist, K?re Bremer
Systematic Biology 56:5, pp 741 – 752 .

LINTREE – Test Molecular Clock and Make Linearized Trees

LINTREE

:: DESCRIPTION

The LINTREE package provides a set of programs for testing the molecular clock on a given topology of a phylogenetic tree and making linearized trees (reestimating branch lengths under the assumption of constant rate of evolutions. The data that can be used are nucleotide or amino acid sequences.

::DEVELOPER

Naoko Takezaki

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux

:: DOWNLOAD

   LINTREE

:: MORE INFORMATION

Citation:

Naoko Takezaki, Andrey Rzhetsky, and Masatoshi Nei
Phylogenetic tests of the molecular clock and linearized trees
Molecular Biology and Evolution 12:823-833, 1995