TriDAMP – MathDAMP extension for Three-way Comparisons of Metabolite Profiles

TriDAMP

:: DESCRIPTION

TriDAMP is a MathDAMP extension for the visualization of three-way comparisons between metabolite profiles. An intuitive color-coding is used to represent the three-way differences on density plots.

::DEVELOPER

Martin Robert , Institute for Advanced Biosciences, Keio University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/MacOsX/Linux
  • Mathematica
  • MathDAMP
:: DOWNLOAD

 available for academic use upon request.

:: MORE INFORMATION

Citation

Baran, R. et al. (2007)
Visualization of three-way comparisons of omics data.
BMC Bioinformatics 8:72

MathDAMP 1.0.0 – Mathematica package for Differential Analysis of Metabolite Profiles

MathDAMP 1.0.0

:: DESCRIPTION

MathDAMP facilitates the visualization of differences between metabolite profiles acquired by hyphenated mass spectrometry techniques. Differences are highlighted by applying arithmetic operations to all corresponding signal intensities from whole raw (automatically preprocessed and normalized) datasets on a datapoint-by-datapoint basis. The results are visualized using density plots

::DEVELOPER

Martin Robert , Institute for Advanced Biosciences, Keio University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/MacOsX/Linux
  • Mathematica
:: DOWNLOAD

 MathDAMP

:: MORE INFORMATION

Citation

MathDAMP: a package for differential analysis of metabolite profiles.
Baran, R., Kochi, H., Saito, N., Suematsu, M., Soga, T., Nishioka, T., Robert, M. and Tomita, M.
BMC Bioinformatics7: 530. (2006)