BaMFA – Bayesian Metabolic Flux Analysis

BaMFA

:: DESCRIPTION

BaMFA is a matlab package of Bayesian metabolic flux analysis that models the reactions of the whole genome-scale cellular system in probabilistic terms, and can infer the full flux vector distribution of genome-scale metabolic systems based on exchange and intracellular (e.g. 13C) flux measurements, steady-state assumptions, and objective function assumptions.

::DEVELOPER

Computational systems biology group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Matlab

:: DOWNLOAD

BaMFA

:: MORE INFORMATION

Citation

Bioinformatics, 35 (14), i548-i557 2019 Jul 15
Bayesian Metabolic Flux Analysis Reveals Intracellular Flux Couplings
Markus Heinonen et al.

FluxEs 2.0 – Metabolic Flux Estimation

FluxEs 2.0

:: DESCRIPTION

FluxEs is a program for metabolic flux analysis using NMR spectra of tracer experiments.

::DEVELOPER

The Centre for Integrative Bioinformatics VU

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Unix

:: DOWNLOAD

 FluxEs

:: MORE INFORMATION

FluxEs 1.0 is freely available via web interface. FluxEs 2.0 is a development version and will be made available via web interface upon request.