MPtopoQuerier – Search Database of Membrane Proteins

MPtopoQuerier

:: DESCRIPTION

MPtopoQuerier is a java applet developed for searching MPtopo, a curated database of membrane proteins with experimentally validated transmembrane (TM) segments. Retrieved sequences can be examined automatically by MPEx, a java-based hydropathy-plot tool.

::DEVELOPER

Stephen White laboratory at UC Irvine

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Linux / MacOSX
  • Java

:: DOWNLOAD

MPtopoQuerier

:: MORE INFORMATION

Citation

Jayasinghe, S., Hristova, K., and White, S. H. (2001).
MPtopo: A database of membrane protein topology.
Protein Sci 10:455-458.

MPEx 3.2 – Tool for Exploring Membrane Proteins

MPEx 3.2

:: DESCRIPTION

MPEx (Membrane Protein Explorer) is a tool for exploring the topology and other features of membrane proteins by means of hydropathy plots based upon thermodynamic and biological principles.

::DEVELOPER

Stephen White laboratory at UC Irvine

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Linux / MacOSX
  • Java

:: DOWNLOAD

MPEx

:: MORE INFORMATION

Citation

Snider C, Jayasinghe S, Hristova K, & White SH (2009).
MPEx: A tool for exploring membrane proteins.
Protein Sci 18:2624-2628. [PubMed Abstract].