LocalFold 1.0
:: DESCRIPTION
LocalFold is a modification of the RNAplfold local folding algorithm. LocalFold only considers base-pairs centred within a window such that (i,j) are not located within the first and last positions of the windows.
::DEVELOPER
Chair for Bioinformatics Freiburg
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- Vienna RNA package
:: DOWNLOAD
:: MORE INFORMATION
Citation
Sita J. Lange, Daniel Maticzka, Mathias Möhl, Joshua N. Gagnon, Chris M. Brown and Rolf Backofen
Global or local? Predicting secondary structure and accessibility in mRNAs