Lagrange 20130526 – Likelihood Analysis of Geographic Range Evolution

Lagrange 20130526

:: DESCRIPTION

Lagrange is a Python package implementing likelihood models for geographic range evolution on phylogenetic trees, with methods for inferring rates of dispersal and local extinction and ancestral ranges.

Lagrange Online Version

::DEVELOPER

STEPHEN A. SMITH ,  Rick Ree

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / Mac OsX
  • Python

:: DOWNLOAD

 Lagrange

:: MORE INFORMATION

Citation

Ree, R H and S A Smith. 2008.
Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis.
Systematic Biology 57(1):4-14.

oncSpectrum 1.0 – Likelihood Analysis of the Spectrum of Somatic Mutations in Cancers

oncSpectrum 1.0

:: DESCRIPTION

oncSpectrum : Likelihood Analysis of the Spectrum of Somatic Mutations in Cancers
::DEVELOPER

Rannala Research Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX / Windows
  • C Compiler

:: DOWNLOAD

 oncSpectrum

:: MORE INFORMATION

Citation

Z. Yang, S. Ro and B. Rannala. 2003.
Likelihood models of somatic mutation and codon substitution in cancer genes.
Genetics 165: 695-705.