PASSIM – The Patient and Sample System for Information Management

PASSIM

:: DESCRIPTION

PASSIM (The Patient and Sample System for Information Management)is an open source software system for managing information in biomedical studies. The data submission form is brief, thus making the system simple to use and customize for any biomedical study easily.
The PASSIM consists of the two parts:

1. Stand-alone Person Management Tool (PMT), used on-site by staff collecting the samples
2. Sample Management Database accessible through the web-based interface

::DEVELOPER

 Institute of Mathematics and Computer Science , EBI.

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

 PASSIM

:: MORE INFORMATION

Citation:

Viksna J, Celms E, Opmanis M, Podnieks K, Rucevskis P, Zarins A, Barrett A, Neogi SG, Krestyaninova M, McCarthy MI, Brazma A, Sarkans U.
PASSIM – an open source software system for managing information in biomedical studies.
BMC Bioinformatics. 2007 Feb 9;8:52.

MIMAS 3.0 – Microarray Information Management and Annotation System

MIMAS 3.0

:: DESCRIPTION

MIMAS (Microarray Information Management and Annotation System) is a freely available system for annotation of GeneChip and BeadArray experiments in a MIAME-compliant manner

::DEVELOPER

MIMAS team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • perl 
  • Web Server

:: DOWNLOAD

 MIMAS

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2009 May 18;10:151.
MIMAS 3.0 is a Multiomics Information Management and Annotation System.
Gattiker A, Hermida L, Liechti R, Xenarios I, Collin O, Rougemont J, Primig M.