Tag: Importance

NIMEFI – Gene Regulatory Network inference using Multiple Ensemble Feature Importance Algorithms

NIMEFI

:: DESCRIPTION

NIMEFI is an R package of gene regulatory network inference using multiple ensemble feature importance algorithms.

::DEVELOPER

Joeri Ruyssinck Email: joeri.ruyssinck@intec.ugent.be

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/ MacOsX
  • R package

:: DOWNLOAD

 NIMEFI

:: MORE INFORMATION

Citation:

PLoS One. 2014 Mar 25;9(3):e92709. doi: 10.1371/journal.pone.0092709. eCollection 2014.
NIMEFI: gene regulatory network inference using multiple ensemble feature importance algorithms.
Ruyssinck J, Huynh-Thu VA, Geurts P, Dhaene T, Demeester P, Saeys Y

GIC – Gene Importance Calculator

GIC

:: DESCRIPTION

GIC is a web server which can efficiently predict the essentiality of both protein-coding genes and long noncoding RNAs (lncRNAs) based on only sequence information.

::DEVELOPER

the Cui Lab

:: SCREENSHOTS

n/a

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

GIC

:: MORE INFORMATION

Citation

Zeng P, Chen J, Meng Y, Zhou Y, Yang J, Cui Q.
Defining Essentiality Score of Protein-Coding Genes and Long Noncoding RNAs.
Front Genet. 2018 Oct 9;9:380. doi: 10.3389/fgene.2018.00380. PMID: 30356729; PMCID: PMC6189311.