Segtrack

:: DESCRIPTION

Segtrack is a library of MATLAB functions useful for prepocessing, segmenting, tracking, postprocessing, and other tasks used for treating biological image data. See the html main_index file included in the dowload package for more details.

::DEVELOPER

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Windows / Linux / Mac OsX

MATLAB

:: DOWNLOAD

:: MORE INFORMATION

This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version.

contact:
T.Bacarian
tbacaria@uci.edu

Sassign 2

:: DESCRIPTION

SASSIGN is a tracking software based on softassign matching algorithm. sassign is C++ and MATLAB package for tracking larger numbers of closely positioned cells (landmarks) with similar geometrical characteristics through timeseries of frames where some cells may divide into two daughter cells. Each frame may contains repositioned cells from the previous frame with some of them divided into two parts, and/or a few number of outliers e.g. cells appeared/disappeared from the boundaries of the frame or miscounted due to preprocessing errors. The C++ processing module is based on an advanced version of the softassign algorithm where simulated annealing is used to minimize a global target function over all possible parent-parent or parent-daughters associations of cells. The Matlab part of the package consists of wrapper routines for running the code and building hierarchical tree of the cells evolution

::DEVELOPER

Scientific Inference Systems Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Windows / Linux / Mac OsX
MATLAB

:: DOWNLOAD

Sassign

:: MORE INFORMATION

Tracking Cell Signals in Fluorescent Images; Gor et. al. (CVPR2005)

Tag: Image Tracking

Segtrack – C++ & MatLab Library for Image Tracking & Segmentation

Segtrack

Sassign 2 – C++ & MatLab Library for Image Target Tracking

Sassign 2