:: DESCRIPTION
NGlycPred predicts the glycan occupancy of N-X-T/S sequons of eukaryotic proteins.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
NO
:: MORE INFORMATION
Citation
Bioinformatics. 2012 Sep 1;28(17):2249-55. doi: 10.1093/bioinformatics/bts426. Epub 2012 Jul 10.
Computational prediction of N-linked glycosylation incorporating structural properties and patterns.
Chuang GY1, Boyington JC, Joyce MG, Zhu J, Nabel GJ, Kwong PD, Georgiev I.
:: DESCRIPTION
GlycoMine is a machine learning-based approach for predicting N-, C- and O-linked glycosylation in the human proteome
::DEVELOPER
Jiangning Song, Ph.D.
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
GlycoMine: a machine learning-based approach for predicting N-, C- and O-linked glycosylation in the human proteome.
Li F, Li C, Wang M, Webb GI, Zhang Y, Whisstock JC, Song J.
Bioinformatics. 2015 Jan 6. pii: btu852.
:: DESCRIPTION
HMMpTM is a Hidden Markov Model based method capable of predicting the topology of transmembrane proteins and the existence of kinase specific phosphorylation and N/O-linked glycosylation sites across the protein sequence.
::DEVELOPER
The Biophysics and Bioinformatics Laboratory
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
NO
:: MORE INFORMATION
Citation
Biochim Biophys Acta. 2014 Feb;1844(2):316-22. doi: 10.1016/j.bbapap.2013.11.001. Epub 2013 Nov 10.
HMMpTM: improving transmembrane protein topology prediction using phosphorylation and glycosylation site prediction.
Tsaousis GN, Bagos PG, Hamodrakas SJ.
:: DESCRIPTION
YinOYang produces neural network predictions for O-ß-GlcNAc attachment sites in eukaryotic protein sequences.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Prediction of glycosylation across the human proteome and the correlation to protein function.
Gupta, R. and S. Brunak.
Pacific Symposium on Biocomputing, 7:310-322, 2002.