GenSeed 1.0.22

:: DESCRIPTION

GenSeed is a Perl program that implements a seed-driven recursive assembly consisting of cycles comprising a similarity search, read selection and assembly. The iterative process results in a progressive extension of the original seed sequence.

::DEVELOPER

GenSeed Team 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• Perl

:: DOWNLOAD

 GenSeed

:: MORE INFORMATION

Citation:

Sobreira, T.J.P. & Gruber, A. (2008).
Sequence-specific reconstruction from fragmentary databases using seed sequences: implementation and validation on SAGE, proteome and generic sequencing data.
Bioinformatics, doi: 10.1093/bioinformatics/btn283