SigTools – Visualizing Genomic Signals

SigTools

:: DESCRIPTION

Sigtools is an R-based visualization package, designed to enable the users with limited programming experience to produce statistical plots of continuous genomic data.

::DEVELOPER

Shohre Masoumi

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux
  • R

:: DOWNLOAD

Sigtools

:: MORE INFORMATION

Citation

Masoumi S, Libbrecht MW, Wiese KC.
SigTools: Exploratory Visualization For Genomic Signals.
Bioinformatics. 2021 Oct 28:btab742. doi: 10.1093/bioinformatics/btab742. Epub ahead of print. PMID: 34718413.

locsmoc 0.1.1 – Piecewise Polynomial Curves for Genomic Signals

locsmoc 0.1.1

:: DESCRIPTION

Locsmoc produces piecewise polynomial models for one-dimensional signals of the type encountered in genomics.

::DEVELOPER

locsmoc team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • Java

:: DOWNLOAD

 locsmoc

:: MORE INFORMATION

Citation

Piecewise polynomial representations of genomic tracks.
Tarabichi M, Detours V, Konopka T.
PLoS One. 2012;7(11):e48941. doi: 10.1371/journal.pone.0048941