Core Hunter 3.2.0

:: DESCRIPTION

Core Hunter is a program for sampling genetic resources. Users can specify the sampling intensity and which genetic measures will be used for selection criteria. For instance, a core subset could be selected that best maximizes the average modified Rogers’ distance, or one that maximizes the Shannon’s diversity index. Users can also maximize multiple genetic measures simultaneously, by specifying a weight for each required measure.

::DEVELOPER

Core Hunter team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux/ MacOsX/Windows
• Java

:: DOWNLOAD

 Core Hunter

:: MORE INFORMATION

Citation

De Beukelaer H, Davenport GF, Fack V.
Core Hunter 3: flexible core subset selection.
BMC Bioinformatics. 2018 May 31;19(1):203. doi: 10.1186/s12859-018-2209-z. PMID: 29855322; PMCID: PMC6092719.

BMC Bioinformatics. 2012 Nov 23;13:312. doi: 10.1186/1471-2105-13-312.
Core Hunter II: fast core subset selection based on multiple genetic diversity measures using Mixed Replica search.
De Beukelaer H, Smykal P, Davenport GF, Fack V.