Tag: FASTER

FastER 1.0 – Identification of Genes with Fast-evolving Regions in closely related Genomes

FastER 1.0

:: DESCRIPTION

FastER is a software for identifying orthologous gene pairs that appear to have fast-evolving regions between two closely related genomes. Its input can be either two closely related whole genome sequences or two closely related orthologous sequences. It consists of two steps: first, it will detect all regions with overrepresented nonsynonymous mutations; second, it will test the nonsynonymous evolution rate against the neutral evolution rate in that gene.

::DEVELOPER

Computational Genomics Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 FastER

:: MORE INFORMATION

Citation:

Identification of genes with fast-evolving regions in microbial genomes
Yu Zheng, Richard J. Roberts and Simon Kasif
Nucl. Acids Res. (2004) 32 (21): 6347-6357.

FASTER 1.0 – Reduce Family Members for GENEHUNTER program

FASTER 1.0

:: DESCRIPTION

FASTER (FAmily SmarT EliminatoR)is to reduce family members so the families can be used in GENEHUNTER program. FASTER eliminates the most redundant individuals according to the set of weights (preferences) (Age, Information about genetic Markers, etc.) The program has several features such as automatical reducement of branches without any affected individuals, etc.

::DEVELOPER

Cyril Hoschl

:: SCREENSHOTS

N/A

::REQUIREMENTS

  • Windows/

:: DOWNLOAD

  FASTER

:: MORE INFORMATION